Affy Analysis Overview

Learn about different techniques for analyzing Affymetrics data. Currently they are manual methods where you can download your data and manipulate it using a variety of methods. See some examples by clicking on the Manual Analysis link. The Affy Pipeline allows users to run a few different analysis methods by interacting with a web interface. A benefit of working with the Affy Pipeline is that all the data is stored for you and the results can be easily loaded into SBEAMS which can then be accessed via the GetExpression page where results can be viewed in Cytoscape. Data can also be analyzed in external programs such as MEV, where a direct link to start and all your data is provided. To learn more follow the MEV link below.