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Get ExpressionGet Expression will allow a user to query data uploaded after the Affy analysis pipeline is completed.
Go to GetExpression Page | Follow the steps below to find the GetExpression Page
1) | Log into Sbeams
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2) | Select the Microarray Link in the main navigation bar
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3) | Click the GetExpression button located on the main navigation bar
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4) | Choose the project(s) of interest
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5) | Select the conditions of interest
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Data Columns to select for use in Cytoscape | The Following columns MUST be selected in order to ensure the data can be loaded into Cytoscape
1) | Data Columns to Display:
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2) | Log 10 Ratio
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3) | False Discovery Rate
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4) | Display Options:
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5) | Show All Conditions if one condition meets criteria
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6) | Pivot Conditions as columns
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Load Results set into Cytoscape | After the query is done, click the link at the bottom of the GetExpression for Cytoscape | |
Go to Cytoscape Section | View Affy Expression Data in Cytoscape |
Go Back to the Pipeline Overview | Go Back to the Pipeline Overview |
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