Cytoscape Jars info. cytoscape_1.0.jar cytoscape_2.0.jar Downloaded from http://cytoscape.org 1.8.05. cytoscape_ps/ Cytoscape version 1 from Paul Shannon, incorporating the Gaggle and an upgraded data matrix browser. Paul has not jar(ed) all the java support classes into a single jar, therefore you will notice a bunch of jars within the cytoscape_ps/jars directory. plugins_1.0/ Populated with Y2layouter.jar complied form CVS source. David R jars were sent by David to use. All the jars need to loaded for getInteractions to load properly getInteractions.jar httpdata.jar sequence.jar plugins_2.0/ Initially populated with jars downloaded from http://cytoscape.org 1.8.05